SMTL ID : 5t3q.1

Crystal structure of the c-Met kinase domain in complex with a pyrazolone inhibitor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x 75H: N-{3-fluoro-4-[(7-methoxyquinolin-4-yl)oxy]phenyl}-1-(2-hydroxy-2-methylpropyl)-5-methyl-3-oxo-2-phenyl-2,3-dihydro-1H-pyrazole-4-carboxamide(Non-covalent)

75H.1: 20 residues within 4Å: Chain A: I.37, F.42, V.45, A.61, K.63, L.65, F.77, E.80, G.81, M.84, L.93, V.108, L.110, P.111, Y.112, M.113, G.116, M.164, A.174, D.175 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:I.37, A:F.42, A:F.42, A:A.61, A:K.63, A:L.65, A:F.77, A:E.80, A:L.93, A:V.108, A:V.108, A:L.110 Hydrogen bonds: A:M.113, A:D.175 75H.2: 20 residues within 4Å: Chain B: I.37, F.42, V.45, A.61, K.63, L.65, F.77, E.80, G.81, M.84, L.93, V.108, L.110, P.111, Y.112, M.113, G.116, M.164, A.174, D.175 15 PLIP interactions: 15 interactions with chain B Hydrophobic interactions: B:I.37, B:F.42, B:F.42, B:A.61, B:K.63, B:L.65, B:F.77, B:E.80, B:L.93, B:V.108, B:V.108, B:L.110 Hydrogen bonds: B:M.113, B:D.175, B:D.175

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Boezio, A.A. et al., Discovery of AMG337: Using structure guided scaffold hydridization to optimize physicochemical properties and target coverage of a MET kinase inhibitor. to be published

Release Date

2016-09-21

Peptides

Hepatocyte growth factor receptor: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Hepatocyte growth factor receptor

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