SMTL ID : 5t3t.1 (4 other biounits)

Ebola virus VP30 CTD bound to nucleoprotein

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-dimer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: F.86, S.87, K.88, H.120 Chain B: R.84 6 PLIP interactions: 3 interactions with chain B, 3 interactions with chain A Hydrogen bonds: B:R.84, A:K.88 Water bridges: B:K.85, B:K.85, A:S.89 Salt bridges: A:H.120 SO4.2: 3 residues within 4Å: Chain A: K.88, H.120, S.121 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:K.88, A:H.120 SO4.3: 3 residues within 4Å: Chain B: K.88, H.120, S.121 2 PLIP interactions: 2 interactions with chain B Salt bridges: B:K.88, B:H.120 SO4.4: 5 residues within 4Å: Chain A: R.84 Chain B: F.86, S.87, K.88, H.120 5 PLIP interactions: 3 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:K.88, A:R.84 Water bridges: B:S.89, A:K.85 Salt bridges: B:H.120

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kirchdoerfer, R.N. et al., The Ebola Virus VP30-NP Interaction Is a Regulator of Viral RNA Synthesis. Plos Pathog. (2016)

Release Date

2016-09-28

Peptides

Fusion protein of Nucleoprotein and Minor nucleoprotein VP30: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Fusion protein of Nucleoprotein and Minor nucleoprotein VP30

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