- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- monomer
- Ligands
- 1 x GLC- BGC- BGC: beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-alpha-D-glucopyranose
- 1 x BGC- BGC: beta-D-glucopyranose-(1-3)-beta-D-glucopyranose(Non-covalent)
- 1 x BGC- BGC- BGC- BGC- BGC- BGC- BGC- BGC- BGC- BGC: beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose
BGC-BGC-BGC-BGC-BGC-BGC-BGC-BGC-BGC-BGC.3: 22 residues within 4Å:- Chain A: D.45, G.47, F.48, Q.51, M.85, T.121, G.377, S.378, D.379, F.529, D.530, A.531, I.598, W.600, K.603, D.605, A.607, T.608, W.609, W.610, N.611
- Ligands: PO4.11
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:S.378, A:S.378, A:D.379
- 12 x PO4: PHOSPHATE ION(Non-functional Binders)
PO4.4: 5 residues within 4Å:- Chain A: H.635, P.636, D.637, Y.638
- Ligands: EDO.19
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:D.637, A:D.637, A:D.637, A:Y.638
- Water bridges: A:R.641
- Salt bridges: A:H.635
PO4.5: 6 residues within 4Å:- Chain A: H.305, H.309, S.573, N.576, E.577, H.583
10 PLIP interactions:10 interactions with chain A- Hydrogen bonds: A:S.573, A:S.573, A:E.577, A:E.577
- Water bridges: A:N.576, A:N.576, A:N.576, A:N.576
- Salt bridges: A:H.309, A:H.583
PO4.6: 6 residues within 4Å:- Chain A: D.195, W.197, S.207, H.211, H.213, K.247
7 PLIP interactions:7 interactions with chain A- Hydrogen bonds: A:D.195, A:S.207, A:S.207
- Water bridges: A:T.208, A:H.211
- Salt bridges: A:H.211, A:K.247
PO4.7: 5 residues within 4Å:- Chain A: E.274, E.553, R.561, H.726, P.727
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:E.553
- Water bridges: A:R.561, A:H.726
- Salt bridges: A:R.561, A:H.726
PO4.8: 6 residues within 4Å:- Chain A: D.357, D.359, R.362, E.679, Y.706, H.710
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:D.359, A:E.679
- Water bridges: A:R.362, A:E.679
- Salt bridges: A:R.362, A:H.710
PO4.9: 3 residues within 4Å:- Chain A: A.107, P.108, H.109
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:H.109
- Salt bridges: A:H.109
PO4.10: 5 residues within 4Å:- Chain A: M.572, N.576, H.634, H.635, P.720
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:N.576
- Water bridges: A:T.344, A:H.635
- Salt bridges: A:H.634, A:H.635
PO4.11: 4 residues within 4Å:- Chain A: H.452
- Ligands: BGC-BGC.2, BGC-BGC.2, BGC-BGC-BGC-BGC-BGC-BGC-BGC-BGC-BGC-BGC.3
4 PLIP interactions:4 interactions with chain A- Water bridges: A:H.452, A:H.452, A:H.452
- Salt bridges: A:H.452
PO4.12: 2 residues within 4Å:- Chain A: H.164, D.183
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:D.183
- Water bridges: A:G.138
- Salt bridges: A:H.164
PO4.13: 3 residues within 4Å:- Chain A: E.407, R.410, A.478
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:E.407, A:E.407, A:A.478
- Salt bridges: A:R.410
PO4.14: 4 residues within 4Å:- Chain A: H.114, H.123, H.125
- Ligands: EDO.21
2 PLIP interactions:2 interactions with chain A- Salt bridges: A:H.114, A:H.125
PO4.15: 4 residues within 4Å:- Chain A: R.503, D.504, Y.510
- Ligands: EDO.30
7 PLIP interactions:7 interactions with chain A- Hydrogen bonds: A:D.504, A:D.505, A:Y.510
- Water bridges: A:Y.150, A:Y.150, A:D.502, A:D.505
- 17 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.16: 6 residues within 4Å:- Chain A: P.304, Y.307, R.308, G.329, T.330, E.585
Ligand excluded by PLIPEDO.17: 8 residues within 4Å:- Chain A: D.149, N.151, Y.154, V.155, R.156, T.169, V.263, R.264
Ligand excluded by PLIPEDO.18: 1 residues within 4Å:- Chain A: D.637
Ligand excluded by PLIPEDO.19: 4 residues within 4Å:- Chain A: V.582, H.583, H.635
- Ligands: PO4.4
Ligand excluded by PLIPEDO.20: 7 residues within 4Å:- Chain A: T.282, S.313, S.314, Q.317, R.338, F.339, T.340
Ligand excluded by PLIPEDO.21: 5 residues within 4Å:- Chain A: H.123, H.125, K.603, D.605
- Ligands: PO4.14
Ligand excluded by PLIPEDO.22: 4 residues within 4Å:- Chain A: D.39, K.431, G.432, K.433
Ligand excluded by PLIPEDO.23: 2 residues within 4Å:- Chain A: R.97, E.99
Ligand excluded by PLIPEDO.24: 3 residues within 4Å:- Chain A: G.401, Y.403, E.404
Ligand excluded by PLIPEDO.25: 4 residues within 4Å:- Chain A: R.64, V.65, D.149, Y.150
Ligand excluded by PLIPEDO.26: 7 residues within 4Å:- Chain A: R.156, L.158, Q.165, A.167, E.180, Y.181, E.182
Ligand excluded by PLIPEDO.27: 7 residues within 4Å:- Chain A: E.256, Q.257, Y.260, V.291, G.293, A.294, P.295
Ligand excluded by PLIPEDO.28: 9 residues within 4Å:- Chain A: S.351, L.352, T.392, F.625, H.626, G.627, Q.704, H.707, W.708
Ligand excluded by PLIPEDO.29: 5 residues within 4Å:- Chain A: D.269, W.270, T.271, T.280, T.282
Ligand excluded by PLIPEDO.30: 6 residues within 4Å:- Chain A: Q.70, Y.150, N.151, D.152, Y.510
- Ligands: PO4.15
Ligand excluded by PLIPEDO.31: 3 residues within 4Å:- Chain A: S.378, K.433, N.434
Ligand excluded by PLIPEDO.32: 4 residues within 4Å:- Chain A: T.278, E.342, L.343, T.344
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Pluvinage, B. et al., Structural Analysis of a Family 81 Glycoside Hydrolase Implicates Its Recognition of beta-1,3-Glucan Quaternary Structure. Structure (2017)
- Release Date
- 2017-06-28
- Peptides
- Glycoside Hydrolase: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- monomer
- Ligands
- 1 x GLC- BGC- BGC: beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-alpha-D-glucopyranose
- 1 x BGC- BGC: beta-D-glucopyranose-(1-3)-beta-D-glucopyranose(Non-covalent)
- 1 x BGC- BGC- BGC- BGC- BGC- BGC- BGC- BGC- BGC- BGC: beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose
- 12 x PO4: PHOSPHATE ION(Non-functional Binders)
- 17 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Pluvinage, B. et al., Structural Analysis of a Family 81 Glycoside Hydrolase Implicates Its Recognition of beta-1,3-Glucan Quaternary Structure. Structure (2017)
- Release Date
- 2017-06-28
- Peptides
- Glycoside Hydrolase: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A