SMTL ID : 5t6o.1

Structure of the catalytic domain of the class I polyhydroxybutyrate synthase from Cupriavidus necator

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-tetramer

Ligands

16 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: R.278, W.285, Q.334, L.337 Ligand excluded by PLIP SO4.2: 3 residues within 4Å: Chain A: F.18, N.20, R.99 Ligand excluded by PLIP SO4.3: 6 residues within 4Å: Chain A: P.181, C.182, W.239, R.242, H.243 Ligands: SO4.4 Ligand excluded by PLIP SO4.4: 5 residues within 4Å: Chain A: G.179, R.242, H.243, Q.247 Ligands: SO4.3 Ligand excluded by PLIP SO4.5: 4 residues within 4Å: Chain B: R.278, W.285, Q.334, L.337 Ligand excluded by PLIP SO4.6: 3 residues within 4Å: Chain B: F.18, N.20, R.99 Ligand excluded by PLIP SO4.7: 6 residues within 4Å: Chain B: P.181, C.182, W.239, R.242, H.243 Ligands: SO4.8 Ligand excluded by PLIP SO4.8: 5 residues within 4Å: Chain B: G.179, R.242, H.243, Q.247 Ligands: SO4.7 Ligand excluded by PLIP SO4.9: 4 residues within 4Å: Chain C: R.278, W.285, Q.334, L.337 Ligand excluded by PLIP SO4.10: 3 residues within 4Å: Chain C: F.18, N.20, R.99 Ligand excluded by PLIP SO4.11: 6 residues within 4Å: Chain C: P.181, C.182, W.239, R.242, H.243 Ligands: SO4.12 Ligand excluded by PLIP SO4.12: 5 residues within 4Å: Chain C: G.179, R.242, H.243, Q.247 Ligands: SO4.11 Ligand excluded by PLIP SO4.13: 4 residues within 4Å: Chain D: R.278, W.285, Q.334, L.337 Ligand excluded by PLIP SO4.14: 3 residues within 4Å: Chain D: F.18, N.20, R.99 Ligand excluded by PLIP SO4.15: 6 residues within 4Å: Chain D: P.181, C.182, W.239, R.242, H.243 Ligands: SO4.16 Ligand excluded by PLIP SO4.16: 5 residues within 4Å: Chain D: G.179, R.242, H.243, Q.247 Ligands: SO4.15 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wittenborn, E.C. et al., Structure of the Catalytic Domain of the Class I Polyhydroxybutyrate Synthase from Cupriavidus necator. J.Biol.Chem. (2016)

Release Date

2016-10-26

Peptides

Poly-beta-hydroxybuterate polymerase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

Poly-beta-hydroxybuterate polymerase