SMTL ID : 5t7b.1

Argonaute-2 - 5'-(E)-vinylphosphonate 2'-O-methyl-uridine modified mrTTR guide RNA complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.53 Å

Oligo State

monomer

Ligands

2 x IPH: PHENOL(Non-covalent)

IPH.1: 9 residues within 4Å: Chain B: F.589, Q.591, P.592, V.593, D.621, A.622, F.655, T.659, F.661 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:F.589, B:V.593, B:A.622, B:F.655 IPH.2: 8 residues within 4Å: Chain B: L.652, I.653, Y.656, K.662, P.663, L.696, E.697, Y.700 6 PLIP interactions: 6 interactions with chain B Hydrophobic interactions: B:Y.656, B:K.662, B:K.662, B:L.696, B:L.696 pi-Stacking: B:Y.700

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Elkayam, E. et al., Protein structure. To Be Published

Release Date

2016-12-14

Peptides

Protein argonaute-2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

B
A

Protein argonaute-2