SMTL ID : 5t86.1

Crystal structure of CDI complex from E. coli A0 34/86

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-1-1-mer

Ligands

5 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 6 residues within 4Å: Chain A: D.60, K.65, H.68, N.70 Chain B: P.98, K.99 7 PLIP interactions: 5 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:N.70, A:N.70 Water bridges: A:K.65, B:K.99 Salt bridges: A:K.65, A:H.68, B:K.99 ACT.2: 5 residues within 4Å: Chain A: W.11, E.12, S.96, T.99, Q.103 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:W.11 Hydrogen bonds: A:E.12, A:Q.103 ACT.3: 3 residues within 4Å: Chain A: K.44, K.102, N.105 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:N.105 Hydrogen bonds: A:N.105 ACT.4: 3 residues within 4Å: Chain A: S.50, D.52, K.54 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.50 ACT.5: 4 residues within 4Å: Chain A: L.36, E.37 Chain B: N.31, F.70 5 PLIP interactions: 4 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:L.36, A:E.37 Hydrogen bonds: A:E.37, A:E.37, B:N.31

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Michalska, K. et al., Crystal structure of CDI complex from E. coli A0 34/86. To Be Published

Release Date

2017-09-13

Peptides

CdiA toxin: A
CdiI immunity protein: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
I

CdiA toxin

CdiI immunity protein