SMTL ID : 5t91.1

Crystal structure of B. subtilis 168 GlpQ in complex with bicine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.53 Å

Oligo State

monomer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 3 residues within 4Å: Chain A: H.18, E.45 Ligands: BCN.2 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.18, A:E.45, H2O.1

1 x BCN: BICINE(Non-covalent)

BCN.2: 12 residues within 4Å: Chain A: H.18, R.19, E.45, D.47, H.60, E.127, Q.163, F.165, L.185, Y.234, F.254 Ligands: CA.1 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:Q.163 Water bridges: A:R.19, A:R.19, A:T.235 Salt bridges: A:H.18, A:R.19, A:E.45, A:H.60

1 x NA: SODIUM ION(Non-functional Binders)

NA.3: 2 residues within 4Å: Chain A: D.65, T.68 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.65

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Myers, C.L. et al., Identification of Two Phosphate Starvation-induced Wall Teichoic Acid Hydrolases Provides First Insights into the Degradative Pathway of a Key Bacterial Cell Wall Component. J. Biol. Chem. (2016)

Release Date

2016-11-02

Peptides

Glycerophosphoryl diester phosphodiesterase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Glycerophosphoryl diester phosphodiesterase

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