SMTL ID : 5ta4.1

Discovery of a Potent Cyclophilin Inhibitor (Compound 8) based on Structural Simplification of Sanglifehrin A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x 838: 18-methoxy-2,11,17-trimethyl-14-(propan-2-yl)-3-oxa-9,12,15,28-tetraazatricyclo[21.3.1.1~5,9~]octacosa-1(27),21,23,25-tetraene-4,10,13,16-tetrone(Non-covalent)

838.1: 14 residues within 4Å: Chain A: R.54, I.56, F.59, M.60, Q.62, G.71, T.72, A.100, N.101, A.102, Q.110, F.112, H.125, N.148 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:I.56, A:F.59, A:A.100, A:Q.110, A:F.112 Hydrogen bonds: A:R.54, A:Q.62, A:N.101, A:N.101 Water bridges: A:R.54, A:R.54

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 2 residues within 4Å: Chain A: S.146, R.147 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.147 Water bridges: A:S.146, A:N.148 Salt bridges: A:R.147

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Steadman, V.A. et al., Discovery of Potent Cyclophilin Inhibitors Based on the Structural Simplification of Sanglifehrin A. J. Med. Chem. (2017)

Release Date

2017-01-25

Peptides

Peptidyl-prolyl cis-trans isomerase A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peptidyl-prolyl cis-trans isomerase A

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