SMTL ID : 5tcv.1

ACC oxidase complex with substrate 1-aminocyclopropane-1-carboxylic acid

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

homo-tetramer

Ligands

4 x NI: NICKEL (II) ION(Non-covalent)

NI.1: 5 residues within 4Å: Chain A: H.177, D.179, H.234 Chain B: E.80 Ligands: 1AC.2 5 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions, 1 Ligand-Ligand interactions Metal complexes: A:H.177, A:D.179, A:H.234, H2O.1, 1AC.2 NI.3: 5 residues within 4Å: Chain A: E.80 Chain B: H.177, D.179, H.234 Ligands: 1AC.4 5 PLIP interactions: 3 interactions with chain B, 1 Ligand-Water interactions, 1 Ligand-Ligand interactions Metal complexes: B:H.177, B:D.179, B:H.234, H2O.1, 1AC.4 NI.5: 5 residues within 4Å: Chain C: H.177, D.179, H.234 Chain D: E.80 Ligands: 1AC.6 5 PLIP interactions: 3 interactions with chain C, 1 Ligand-Water interactions, 1 Ligand-Ligand interactions Metal complexes: C:H.177, C:D.179, C:H.234, H2O.1, 1AC.6 NI.7: 5 residues within 4Å: Chain C: E.80 Chain D: H.177, D.179, H.234 Ligands: 1AC.8 5 PLIP interactions: 3 interactions with chain D, 1 Ligand-Water interactions, 1 Ligand-Ligand interactions Metal complexes: D:H.177, D:D.179, D:H.234, H2O.2, 1AC.8

4 x 1AC: 1-AMINOCYCLOPROPANECARBOXYLIC ACID(Non-covalent)

1AC.2: 9 residues within 4Å: Chain A: H.177, D.179, I.184, L.186, L.195, N.216, H.234 Chain B: E.80 Ligands: NI.1 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:L.186, A:L.195 Hydrogen bonds: A:N.216, A:N.216 Salt bridges: A:H.177, A:H.234 1AC.4: 9 residues within 4Å: Chain A: E.80 Chain B: H.177, D.179, I.184, L.186, L.195, N.216, H.234 Ligands: NI.3 6 PLIP interactions: 6 interactions with chain B Hydrophobic interactions: B:L.186, B:L.195 Hydrogen bonds: B:N.216, B:N.216 Salt bridges: B:H.177, B:H.234 1AC.6: 9 residues within 4Å: Chain C: H.177, D.179, I.184, L.186, L.195, N.216, H.234 Chain D: E.80 Ligands: NI.5 6 PLIP interactions: 6 interactions with chain C Hydrophobic interactions: C:L.186, C:L.195 Hydrogen bonds: C:N.216, C:N.216 Salt bridges: C:H.177, C:H.234 1AC.8: 9 residues within 4Å: Chain C: E.80 Chain D: H.177, D.179, I.184, L.186, L.195, N.216, H.234 Ligands: NI.7 6 PLIP interactions: 6 interactions with chain D Hydrophobic interactions: D:L.186, D:L.195 Hydrogen bonds: D:N.216, D:N.216 Salt bridges: D:H.177, D:H.234

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gunawardana, D.M. et al., ACC oxidase complex with substrate 1-aminocyclopropane-1-carboxylic acid. To Be Published

Release Date

2017-09-20

Peptides

1-aminocyclopropane-1-carboxylate oxidase 1: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

1-aminocyclopropane-1-carboxylate oxidase 1

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