SMTL ID : 5tf4.2 (1 other biounit)

Crystal structure of enoyl-(acyl carrier protein) reductase from Bartonella henselae in complext with NAD

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

homo-tetramer

Ligands

4 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.1: 25 residues within 4Å: Chain A: G.19, L.20, A.21, S.25, I.26, Q.46, M.50, C.69, D.70, V.71, A.97, I.98, G.99, F.100, I.124, L.149, T.150, Y.151, K.168, A.194, G.195, P.196, I.197, T.199, A.201 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:Y.151 Hydrogen bonds: A:G.19, A:S.25, A:I.26, A:Q.46, A:D.70, A:V.71, A:I.98, A:G.99, A:K.168, A:I.197, A:I.197, A:T.199, A:A.201 Water bridges: A:G.19, A:N.22, A:A.27, A:I.98, A:Y.161 NAD.2: 28 residues within 4Å: Chain B: G.19, L.20, A.21, S.25, I.26, Q.46, M.50, C.69, D.70, V.71, A.97, I.98, G.99, F.100, I.124, L.149, T.150, Y.151, K.168, A.194, G.195, P.196, I.197, T.199, L.200, A.201, A.202 Ligands: GOL.3 20 PLIP interactions: 20 interactions with chain B Hydrophobic interactions: B:I.26, B:Y.151, B:A.194 Hydrogen bonds: B:G.19, B:S.25, B:I.26, B:Q.46, B:D.70, B:V.71, B:I.98, B:G.99, B:K.168, B:I.197, B:I.197, B:T.199, B:A.201 Water bridges: B:G.19, B:A.27, B:I.98, B:L.200 NAD.4: 25 residues within 4Å: Chain C: G.19, L.20, A.21, S.25, I.26, Q.46, M.50, C.69, D.70, V.71, A.97, I.98, G.99, F.100, I.124, L.149, T.150, Y.151, K.168, A.194, G.195, P.196, I.197, T.199, A.201 19 PLIP interactions: 19 interactions with chain C Hydrophobic interactions: C:Y.151 Hydrogen bonds: C:G.19, C:S.25, C:I.26, C:Q.46, C:D.70, C:V.71, C:I.98, C:G.99, C:K.168, C:I.197, C:I.197, C:T.199, C:T.199, C:A.201 Water bridges: C:G.19, C:N.22, C:A.27, C:I.98 NAD.5: 28 residues within 4Å: Chain D: G.19, L.20, A.21, S.25, I.26, Q.46, M.50, C.69, D.70, V.71, A.97, I.98, G.99, F.100, I.124, L.149, T.150, Y.151, K.168, A.194, G.195, P.196, I.197, T.199, L.200, A.201, A.202 Ligands: GOL.6 21 PLIP interactions: 21 interactions with chain D Hydrophobic interactions: D:I.26, D:Y.151, D:A.194 Hydrogen bonds: D:G.19, D:S.25, D:I.26, D:Q.46, D:D.70, D:V.71, D:I.98, D:G.99, D:K.168, D:I.197, D:I.197, D:T.199, D:T.199, D:A.201 Water bridges: D:G.19, D:A.27, D:I.98, D:L.200

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 5 residues within 4Å: Chain B: Y.161, K.168, A.202, I.205 Ligands: NAD.2 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:Y.161 GOL.6: 5 residues within 4Å: Chain D: Y.161, K.168, A.202, I.205 Ligands: NAD.5 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Abendroth, J. et al., Crystal structure of enoyl-(acyl carrier protein) reductase from Bartonella henselae in complext with NAD. to be published

Release Date

2016-11-09

Peptides

Enoyl-[acyl-carrier-protein] reductase [NADH]: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
F

C
E

D
F

Enoyl-[acyl-carrier-protein] reductase [NADH]

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