SMTL ID : 5tf9.1 (1 other biounit)

Crystal structure of WNK1 in complex with Mn2+AMPPNP and WNK476

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x 7AV: {2-[(4-chlorophenyl)methoxy]phenyl}{5-[2-(methylamino)-1,3-thiazol-4-yl]-2,3-dihydro-1H-indol-1-yl}methanone(Non-covalent)

7AV.1: 15 residues within 4Å: Chain A: L.48, R.51, F.61, E.64, L.68, L.71, V.77, F.79, L.95, T.97, I.141, D.164, L.165, G.166, A.168 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:L.48, A:F.61, A:L.68, A:F.79, A:L.95, A:L.95, A:A.168 Hydrogen bonds: A:R.51, A:R.51, A:V.77, A:L.165

1 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)

ANP.2: 15 residues within 4Å: Chain A: G.24, G.26, S.27, K.29, V.31, A.44, T.97, E.98, L.99, M.100, K.147, D.149, F.152, D.164 Ligands: MN.3 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:R.25, A:S.27, A:T.97, A:E.98, A:M.100, A:K.147, A:K.147 Water bridges: A:T.104 Salt bridges: A:K.29

1 x MN: MANGANESE (II) ION(Non-covalent)

MN.3: 3 residues within 4Å: Chain A: N.150, D.164 Ligands: ANP.2 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.164

1 x CA: CALCIUM ION(Non-covalent)

CA.4: 2 residues within 4Å: Chain A: S.219, C.221 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:S.219, A:C.221, H2O.2

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yamada, K. et al., Discovery and Characterization of Allosteric WNK Kinase Inhibitors. ACS Chem. Biol. (2016)

Release Date

2016-10-19

Peptides

Serine/threonine-protein kinase WNK1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Serine/threonine-protein kinase WNK1

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