SMTL ID : 5tfa.1

Nucleotide-binding domain 1 of the human cystic fibrosis transmembrane conductance regulator (CFTR) with dUTP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.87 Å

Oligo State

monomer

Ligands

1 x DUT: DEOXYURIDINE-5'-TRIPHOSPHATE(Non-covalent)

DUT.1: 12 residues within 4Å: Chain A: W.16, V.23, S.42, T.43, G.44, A.45, G.46, K.47, T.48, S.49, Q.76 Ligands: MG.2 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:W.16 Hydrogen bonds: A:T.43, A:G.44, A:A.45, A:G.46, A:K.47, A:T.48, A:S.49, A:S.49, A:S.49, A:Q.76 Water bridges: A:K.47 Salt bridges: A:K.47, A:K.47 pi-Stacking: A:W.16

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 4 residues within 4Å: Chain A: T.48, Q.76, D.155 Ligands: DUT.1 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:T.48, H2O.1, H2O.2

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, C. et al., Thermodynamic correction of F508del-CFTR by ligand binding to a remote site in the mutated domain. To Be Published

Release Date

2018-05-09

Peptides

Cystic fibrosis transmembrane conductance regulator: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cystic fibrosis transmembrane conductance regulator

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