SMTL ID : 5th4.1

Crystal Structure of 1-hydroxypyridine-2(1H)-thione bound to human carbonic anhydrase 2 L198G

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.47 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: H.94, H.96, H.119, T.198 Ligands: BEW.2 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.94, A:H.96, A:H.119

1 x BEW: 1-hydroxy-2-sulfanylpyridinium(Non-covalent)

BEW.2: 10 residues within 4Å: Chain A: Q.92, H.94, H.96, H.119, V.121, T.198, T.199, W.208 Ligands: ZN.1, DMS.4 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:V.121 Hydrogen bonds: A:T.199 pi-Cation interactions: A:H.94

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 4 residues within 4Å: Chain A: Y.7, D.242, W.244, P.246 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.7, A:W.244

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.4: 6 residues within 4Å: Chain A: G.197, T.199, P.201, L.202, L.203 Ligands: BEW.2 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.197, A:L.203

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dick, B.L. et al., Effect of donor atom identity on metal-binding pharmacophore coordination. J. Biol. Inorg. Chem. (2017)

Release Date

2017-04-26

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Carbonic anhydrase 2

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