SMTL ID : 5tka.1

Structure of the HD-domain phosphohydrolase OxsA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

homo-dimer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain A: H.31, H.66, D.67, D.132 6 PLIP interactions: 4 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.31, A:H.66, A:D.67, A:D.132, H2O.1, H2O.1 MG.3: 4 residues within 4Å: Chain B: H.31, H.66, D.67, D.132 6 PLIP interactions: 4 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:H.31, B:H.66, B:D.67, B:D.132, H2O.3, H2O.3

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 5 residues within 4Å: Chain A: Y.137, G.159, L.162, D.163, Q.176 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.176 Water bridges: A:Y.137, A:Y.137 EDO.4: 5 residues within 4Å: Chain B: Y.137, G.159, L.162, D.163, Q.176 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:Q.176

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bridwell-Rabb, J. et al., An HD domain phosphohydrolase active site tailored for oxetanocin-A biosynthesis. Proc. Natl. Acad. Sci. U.S.A. (2016)

Release Date

2016-11-16

Peptides

OxsA protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

OxsA protein

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