SMTL ID : 5tpk.1

Crystal Structure of Mouse Protocadherin-15 EC7-8 V875A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

4 x CA: CALCIUM ION(Non-covalent)

CA.1: 5 residues within 4Å: Chain A: E.21, E.22, N.70, E.72, D.106 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.21, A:E.22, A:E.72, A:D.106, H2O.4 CA.2: 7 residues within 4Å: Chain A: E.21, E.72, D.103, I.104, D.106, N.107, D.139 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.21, A:D.103, A:I.104, A:D.106, A:D.139 CA.3: 4 residues within 4Å: Chain A: D.105, N.107, D.137, D.139 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.105, A:N.107, A:D.137, H2O.1, H2O.3 CA.4: 6 residues within 4Å: Chain A: N.3, N.5, D.35, D.37, N.41, D.85 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:N.5, A:D.35, A:D.37, A:N.41, A:D.85

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Choudhary, D. et al., Structural determinants of protocadherin-15 mechanics and function in hearing and balance perception. Proc.Natl.Acad.Sci.USA (2020)

Release Date

2017-10-25

Peptides

Protocadherin-15: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Protocadherin-15