SMTL ID : 5tsa.1

Crystal structure of the Zrt-/Irt-like protein from Bordetella bronchiseptica with bound Zn2+

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

6 x ZN: ZINC ION(Non-covalent)(Non-functional Binders)

ZN.1: 4 residues within 4Å: Chain A: M.99, E.181, Q.207, E.211 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.181, A:E.211, A:E.211, H2O.1, H2O.1 ZN.2: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) ZN.3: 2 residues within 4Å: Chain A: H.177, E.276 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:H.177, A:E.276 ZN.4: 2 residues within 4Å: Chain A: D.144, H.275 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:D.144, A:H.275 ZN.5: 3 residues within 4Å: Chain A: D.144, H.177, H.275 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.144, H2O.1, H2O.1 ZN.6: 2 residues within 4Å: Chain A: D.89, H.286 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:D.89, A:D.89, A:H.286

1 x CD: CADMIUM ION(Non-covalent)

CD.7: 6 residues within 4Å: Chain A: N.178, E.181, Q.207, D.208, E.211, E.240 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.181, A:D.208, A:E.211, A:E.240, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, T. et al., Crystal structures of a ZIP zinc transporter reveal a binuclear metal center in the transport pathway. Sci Adv (2017)

Release Date

2017-09-20

Peptides

Membrane protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Membrane protein

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