SMTL ID : 5twx.2 (4 other biounits)

Crystal Structure of BRD9 bromodomain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.55 Å

Oligo State

monomer

Ligands

1 x 7P7: N-[6-({2-[(3S)-2,6-dioxopiperidin-3-yl]-1,3-dioxo-2,3-dihydro-1H-isoindol-4-yl}oxy)hexyl]-2-(4-{2-[N-(1,1-dioxo-1lambda~6~-thian-4-yl)carbamimidoyl]-5-methyl-4-oxo-4,5-dihydrothieno[3,2-c]pyridin-7-yl}-2-methoxyphenoxy)acetamide(Non-covalent)

7P7.1: 11 residues within 4Å: Chain A: F.31, F.32, V.36, I.40, A.41, A.83, Y.86, N.87, R.88, T.91, Y.93 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:I.40, A:T.91, A:Y.93 Hydrogen bonds: A:I.40, A:N.87 pi-Stacking: A:F.31, A:Y.93, A:Y.93

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Remillard, D. et al., Degradation of the BAF Complex Factor BRD9 by Heterobifunctional Ligands. Angew. Chem. Int. Ed. Engl. (2017)

Release Date

2017-09-27

Peptides

Bromodomain-containing protein 9: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Bromodomain-containing protein 9

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