SMTL ID : 5tx7.1

Crystal structure of D-isomer specific 2-hydroxyacid dehydrogenase from Desulfovibrio vulgaris

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.51 Å

Oligo State

homo-dimer

Ligands

2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.1: 3 residues within 4Å: Chain A: W.139 Chain B: Y.10, P.14 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:W.139 Water bridges: A:D.140 PEG.2: 3 residues within 4Å: Chain A: A.119, H.123 Chain B: L.120 1 PLIP interactions: 1 interactions with chain B Water bridges: B:A.119

1 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)

PGE.3: 5 residues within 4Å: Chain A: Y.10, P.14 Chain B: F.138, W.139, D.140 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:W.139 Water bridges: B:S.133, B:D.140, B:D.140

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Czub, M.P. et al., Crystal structure of D-isomer specific 2-hydroxyacid dehydrogenase from Desulfovibrio vulgaris. to be published

Release Date

2016-12-07

Peptides

D-isomer specific 2-hydroxyacid dehydrogenase family protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

D-isomer specific 2-hydroxyacid dehydrogenase family protein