SMTL ID : 5txv.1 (3 other biounits)

HslU P21 cell with 4 hexamers

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 7.09 Å

Oligo State

homo-hexamer

Ligands

6 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 16 residues within 4Å: Chain A: H.15, I.16, I.17, P.57, T.58, G.59, V.60, G.61, K.62, T.63, E.64, K.79, L.334, A.391, R.392, H.395 17 PLIP interactions: 17 interactions with chain A Hydrogen bonds: A:I.17, A:P.57, A:T.58, A:G.59, A:V.60, A:V.60, A:G.61, A:K.62, A:T.63, A:T.63, A:T.63, A:E.64, A:E.64 Salt bridges: A:K.62, A:K.79, A:R.392, A:R.392 ADP.2: 16 residues within 4Å: Chain B: H.15, I.16, I.17, P.57, T.58, G.59, V.60, G.61, K.62, T.63, E.64, K.79, L.334, A.391, R.392 Chain C: E.285 17 PLIP interactions: 17 interactions with chain B Hydrogen bonds: B:I.17, B:P.57, B:T.58, B:G.59, B:V.60, B:V.60, B:G.61, B:K.62, B:T.63, B:T.63, B:T.63, B:E.64, B:E.64 Salt bridges: B:K.62, B:K.79, B:R.392, B:R.392 ADP.3: 17 residues within 4Å: Chain C: H.15, I.16, I.17, P.57, T.58, G.59, V.60, G.61, K.62, T.63, E.64, K.79, L.334, I.342, A.391, R.392, H.395 15 PLIP interactions: 15 interactions with chain C Hydrogen bonds: C:I.17, C:P.57, C:G.59, C:V.60, C:V.60, C:G.61, C:K.62, C:T.63, C:T.63, C:T.63, C:E.64 Salt bridges: C:K.62, C:K.79, C:R.392, C:R.392 ADP.4: 15 residues within 4Å: Chain D: H.15, I.16, I.17, P.57, T.58, G.59, V.60, G.61, K.62, T.63, E.64, K.79, L.334, A.391, R.392 14 PLIP interactions: 14 interactions with chain D Hydrogen bonds: D:I.17, D:G.59, D:V.60, D:V.60, D:G.61, D:K.62, D:T.63, D:T.63, D:T.63, D:E.64, D:E.64 Salt bridges: D:K.62, D:K.79, D:R.392 ADP.5: 15 residues within 4Å: Chain E: H.15, I.16, I.17, P.57, T.58, G.59, V.60, G.61, K.62, T.63, E.64, K.79, A.391, R.392, H.395 16 PLIP interactions: 16 interactions with chain E Hydrogen bonds: E:I.17, E:P.57, E:G.59, E:V.60, E:V.60, E:G.61, E:K.62, E:T.63, E:T.63, E:T.63, E:E.64, E:E.64 Salt bridges: E:K.62, E:K.79, E:R.392, E:R.392 ADP.6: 14 residues within 4Å: Chain F: H.15, I.16, I.17, P.57, T.58, G.59, V.60, G.61, K.62, T.63, E.64, K.79, A.391, R.392 17 PLIP interactions: 17 interactions with chain F Hydrogen bonds: F:I.17, F:P.57, F:T.58, F:G.59, F:V.60, F:V.60, F:G.61, F:K.62, F:T.63, F:T.63, F:T.63, F:E.64, F:E.64 Salt bridges: F:K.62, F:K.79, F:R.392, F:R.392

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Baytshtok, V. et al., Covalently linked HslU hexamers support a probabilistic mechanism that links ATP hydrolysis to protein unfolding and translocation. J. Biol. Chem. (2017)

Release Date

2017-03-01

Peptides

ATP-dependent protease ATPase subunit HslU: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

ATP-dependent protease ATPase subunit HslU

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