SMTL ID : 5u1j.2 (2 other biounits)

Structure of pNOB8 ParA bound to nonspecific DNA

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.95 Å

Oligo State

homo-dimer

Ligands

2 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Covalent)

ANP.1: 15 residues within 4Å: Chain A: G.20, G.21, V.22, G.23, K.24, T.25, T.26, D.48, Q.50, P.151, R.214, S.262, L.268, S.269 Ligands: ANP.2 18 PLIP interactions: 18 interactions with chain A Hydrogen bonds: A:G.21, A:V.22, A:G.23, A:G.23, A:K.24, A:T.25, A:T.25, A:T.26, A:T.26, A:D.48, A:D.48, A:Q.50, A:S.52, A:R.214, A:R.214, A:S.269 pi-Cation interactions: A:R.214, A:R.214 ANP.2: 16 residues within 4Å: Chain A: R.214 Chain B: G.21, K.24, T.25, T.26, D.48, Q.50, S.52, P.151, L.261, S.262, S.263, L.268, S.269, L.271 Ligands: ANP.1 12 PLIP interactions: 1 interactions with chain A, 11 interactions with chain B Hydrogen bonds: A:R.214, B:G.21, B:K.24, B:K.24, B:T.25, B:T.26, B:T.26, B:D.48, B:S.52, B:S.52, B:S.262, B:S.269

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, H. et al., Structures of partition protein ParA with nonspecific DNA and ParB effector reveal molecular insights into principles governing Walker-box DNA segregation. Genes Dev. (2017)

Release Date

2017-04-19

Peptides

Uncharacterized protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
D

Uncharacterized protein

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