SMTL ID : 5u69.1

Polycomb protein EED in complex with inhibitor: (3R,4S)-1-[(2-methoxyphenyl)methyl]-N,N-dimethyl-4-(1-methylindol-3-yl)pyrrolidin-3-amine

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.28 Å

Oligo State

monomer

Ligands

1 x LQD: (3R,4S)-1-[(2-methoxyphenyl)methyl]-N,N-dimethyl-4-(1-methylindol-3-yl)pyrrolidin-3-amine(Non-covalent)

LQD.1: 11 residues within 4Å: Chain A: F.25, Y.76, N.122, E.166, L.168, M.184, D.238, Y.293, M.294, R.295, R.342 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:F.25, A:Y.76, A:D.238, A:Y.293, A:Y.293, A:R.295 Water bridges: A:N.122 Salt bridges: A:E.166 pi-Cation interactions: A:Y.293, A:R.295

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Curtin, M.L. et al., SAR of amino pyrrolidines as potent and novel protein-protein interaction inhibitors of the PRC2 complex through EED binding. Bioorg. Med. Chem. Lett. (2017)

Release Date

2017-03-15

Peptides

Polycomb protein EED: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Polycomb protein EED

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