SMTL ID : 5u7p.1

Crystal structure of a nucleoside triphosphate diphosphohydrolase (NTPDase) from the legume Trifolium repens

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.89 Å

Oligo State

monomer

Ligands

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 5 residues within 4Å: Chain A: G.14, S.15, T.16, R.19, T.88 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:S.15, A:S.15, A:T.16, A:T.16, A:T.88 Water bridges: A:R.19, A:T.88 Salt bridges: A:R.19 PO4.2: 5 residues within 4Å: Chain A: A.89, G.160, G.161, G.162, S.163 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:G.161, A:G.162, A:S.163, A:S.163 Water bridges: A:E.131, A:S.163, A:S.163, A:Q.165

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Summers, E.L. et al., Structures and kinetics for plant nucleoside triphosphate diphosphohydrolases support a domain motion catalytic mechanism. Protein Sci. (2017)

Release Date

2017-05-31

Peptides

Apyrase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Apyrase

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