SMTL ID : 5u7r.2 (1 other biounit)

Identification of A New Class of Potent Cdc7 Inhibitors Designed by Putative Pharmacophore Model: Synthesis and Biological Evaluation of 2,3-Dihydrothieno[3,2-d]pyrimidin-4(1H)-ones

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.33 Å

Oligo State

homo-dimer

Ligands

2 x 81G: (1s,4s)-4-(4-fluorophenyl)-4-hydroxy-6'-(5-methyl-1H-pyrazol-4-yl)-1'H-spiro[cyclohexane-1,2'-thieno[3,2-d]pyrimidin]-4'(3'H)-one(Non-covalent)

81G.1: 18 residues within 4Å: Chain A: I.76, R.78, G.79, V.84, A.97, K.99, E.118, V.131, M.147, E.148, Y.149, M.150, D.196, N.197, L.199, A.209, D.210, F.362 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:I.76, A:V.84, A:D.196, A:L.199, A:F.362 Hydrogen bonds: A:K.99, A:E.118, A:M.150, A:D.210, A:D.210 81G.2: 17 residues within 4Å: Chain B: I.76, R.78, G.79, V.84, A.97, K.99, E.118, V.131, M.147, E.148, Y.149, M.150, D.196, L.199, A.209, D.210, F.362 6 PLIP interactions: 6 interactions with chain B Hydrophobic interactions: B:I.76, B:D.196, B:F.362 Hydrogen bonds: B:K.99, B:M.150, B:D.210

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kurasawa, O. et al., Identification of a new class of potent Cdc7 inhibitors designed by putative pharmacophore model: Synthesis and biological evaluation of 2,3-dihydrothieno[3,2-d]pyrimidin-4(1H)-ones. Bioorg. Med. Chem. (2017)

Release Date

2017-03-29

Peptides

Rho-associated protein kinase 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

Rho-associated protein kinase 2

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