- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.34 Å
- Oligo State
- monomer
- Ligands
- 1 x NAG- NAG- FUC: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
- 2 x I3C: 5-amino-2,4,6-triiodobenzene-1,3-dicarboxylic acid(Non-covalent)
- 16 x IOD: IODIDE ION(Non-functional Binders)
IOD.4: 1 residues within 4Å:- Chain A: N.183
Ligand excluded by PLIPIOD.5: 4 residues within 4Å:- Chain A: Y.68, N.71, N.161, N.163
Ligand excluded by PLIPIOD.6: 0 residues within 4Å:- (No contacts)
Ligand excluded by PLIPIOD.7: 6 residues within 4Å:- Chain A: Y.304, V.305, V.306, R.312, R.323, K.327
Ligand excluded by PLIPIOD.8: 2 residues within 4Å:- Chain A: D.286, R.287
Ligand excluded by PLIPIOD.9: 6 residues within 4Å:- Chain A: T.308, Y.310, D.320, N.321, R.322, R.323
Ligand excluded by PLIPIOD.10: 2 residues within 4Å:- Chain A: T.257, I.258
Ligand excluded by PLIPIOD.11: 4 residues within 4Å:- Chain A: D.44, L.45, P.46
- Ligands: IOD.12
Ligand excluded by PLIPIOD.12: 3 residues within 4Å:- Chain A: N.42, L.45
- Ligands: IOD.11
Ligand excluded by PLIPIOD.13: 1 residues within 4Å:- Chain A: H.52
Ligand excluded by PLIPIOD.14: 6 residues within 4Å:- Chain A: K.70, N.74, K.81, I.82, V.83, Q.84
Ligand excluded by PLIPIOD.15: 3 residues within 4Å:- Chain A: R.21, T.349, K.350
Ligand excluded by PLIPIOD.16: 5 residues within 4Å:- Chain A: P.100, F.101, S.244, E.247, N.248
Ligand excluded by PLIPIOD.17: 2 residues within 4Å:- Chain A: R.21, K.22
Ligand excluded by PLIPIOD.18: 2 residues within 4Å:- Chain A: M.328, N.331
Ligand excluded by PLIPIOD.19: 5 residues within 4Å:- Chain A: I.124, E.127, F.128, V.225, L.265
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Gebai, A. et al., Structural basis for the activation of acid ceramidase. Nat Commun (2018)
- Release Date
- 2018-03-28
- Peptides
- Acid ceramidase: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.34 Å
- Oligo State
- monomer
- Ligands
- 1 x NAG- NAG- FUC: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
- 2 x I3C: 5-amino-2,4,6-triiodobenzene-1,3-dicarboxylic acid(Non-covalent)
- 16 x IOD: IODIDE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Gebai, A. et al., Structural basis for the activation of acid ceramidase. Nat Commun (2018)
- Release Date
- 2018-03-28
- Peptides
- Acid ceramidase: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
B