SMTL ID : 5u89.1

Crystal structure of a cross-module fragment from the dimodular NRPS DhbF

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.08 Å

Oligo State

hetero-1-1-mer

Ligands

1 x MJ8: 5'-({[(2R)-3-amino-2-{[2-({N-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl]sulfanyl}propyl]sulfonyl}amino)-5'-deoxyadenosine(Covalent)

MJ8.1: 17 residues within 4Å: Chain A: F.222, D.223, I.224, G.292, E.293, A.294, N.312, L.313, Y.314, G.315, P.316, I.321, W.322, D.404, Y.416, R.419, S.566 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:G.292, A:N.312, A:N.312, A:G.315, A:P.316, A:D.404 pi-Stacking: A:Y.314

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tarry, M.J. et al., X-Ray Crystallography and Electron Microscopy of Cross- and Multi-Module Nonribosomal Peptide Synthetase Proteins Reveal a Flexible Architecture. Structure (2017)

Release Date

2017-05-10

Peptides

Amino acid adenylation domain protein: A
MbtH domain protein: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Amino acid adenylation domain protein

MbtH domain protein