SMTL ID : 5ubu.1

2.75 Angstrom Resolution Crystal Structure of Acetamidase from Yersinia enterocolitica.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.75 Å

Oligo State

homo-tetramer

Ligands

8 x NA: SODIUM ION(Non-functional Binders)

NA.1: 7 residues within 4Å: Chain A: N.85, N.193, D.195, D.220, H.222, E.229 Ligands: NA.2 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.85, A:N.193, A:N.193 NA.2: 5 residues within 4Å: Chain A: D.220, H.222, E.229, E.236 Ligands: NA.1 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.220 NA.3: 5 residues within 4Å: Chain B: D.220, H.222, E.229, E.236 Ligands: NA.4 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:E.236 NA.4: 7 residues within 4Å: Chain B: N.85, N.193, D.195, D.220, H.222, E.229 Ligands: NA.3 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:N.85, B:N.193, B:E.229 NA.5: 7 residues within 4Å: Chain C: N.85, N.193, D.195, D.220, H.222, E.229 Ligands: NA.6 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:N.85, C:N.193, C:E.229 NA.6: 5 residues within 4Å: Chain C: D.220, H.222, E.229, E.236 Ligands: NA.5 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:D.220 NA.7: 5 residues within 4Å: Chain D: D.220, H.222, E.229, E.236 Ligands: NA.8 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:E.229 NA.8: 7 residues within 4Å: Chain D: N.85, N.193, D.195, D.220, H.222, E.229 Ligands: NA.7 3 PLIP interactions: 3 interactions with chain D Hydrogen bonds: D:N.85, D:N.193, D:D.195

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Minasov, G. et al., 2.75 Angstrom Resolution Crystal Structure of Acetamidase from Yersinia enterocolitica. To Be Published

Release Date

2017-01-04

Peptides

Putative acetamidase/formamidase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Putative acetamidase/formamidase