- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.72 Å
- Oligo State
- hetero-2-2-mer
- Ligands
- 2 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)
- 2 x ORO: OROTIC ACID(Non-covalent)
ORO.2: 10 residues within 4Å:- Chain A: K.44, N.68, A.69, I.70, G.71, L.72, N.128, N.193, T.194
- Ligands: FMN.1
12 PLIP interactions:12 interactions with chain A- Hydrophobic interactions: A:L.72
- Hydrogen bonds: A:N.68, A:N.68, A:N.68, A:I.70, A:G.71, A:L.72, A:N.128, A:N.193, A:N.193, A:T.194
- Salt bridges: A:K.44
ORO.8: 10 residues within 4Å:- Chain C: K.44, N.68, A.69, I.70, G.71, L.72, N.128, N.193, T.194
- Ligands: FMN.7
11 PLIP interactions:11 interactions with chain C- Hydrophobic interactions: C:L.72
- Hydrogen bonds: C:N.68, C:N.68, C:N.68, C:I.70, C:G.71, C:L.72, C:N.128, C:N.193, C:N.193
- Salt bridges: C:K.44
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- 2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
FAD.4: 17 residues within 4Å:- Chain B: R.53, P.54, I.55, S.56, L.70, Y.71, R.72, G.74, S.78, G.79, T.80, I.120, M.220, E.221, S.222, R.223, M.224
17 PLIP interactions:17 interactions with chain B- Hydrophobic interactions: B:E.221, B:E.221
- Hydrogen bonds: B:P.54, B:S.56, B:L.70, B:R.72, B:G.74, B:G.79, B:T.80, B:E.221, B:R.223
- Water bridges: B:R.72, B:E.221, B:M.224
- Salt bridges: B:R.53, B:R.53
- pi-Cation interactions: B:R.223
FAD.10: 17 residues within 4Å:- Chain D: R.53, P.54, I.55, S.56, L.70, Y.71, R.72, G.74, S.78, G.79, T.80, I.120, M.220, E.221, S.222, R.223, M.224
16 PLIP interactions:16 interactions with chain D- Hydrophobic interactions: D:E.221, D:E.221
- Hydrogen bonds: D:P.54, D:S.56, D:L.70, D:R.72, D:G.74, D:G.79, D:T.80, D:R.223
- Water bridges: D:R.72, D:E.221, D:M.224
- Salt bridges: D:R.53, D:R.53
- pi-Cation interactions: D:R.223
- 2 x FES: FE2/S2 (INORGANIC) CLUSTER(Non-covalent)
FES.5: 11 residues within 4Å:- Chain B: M.224, A.225, C.226, G.227, G.229, A.230, C.231, Y.232, A.233, C.234, C.249
4 PLIP interactions:4 interactions with chain B,- Metal complexes: B:C.226, B:C.231, B:C.234, B:C.249
FES.11: 11 residues within 4Å:- Chain D: M.224, A.225, C.226, G.227, G.229, A.230, C.231, Y.232, A.233, C.234, C.249
4 PLIP interactions:4 interactions with chain D,- Metal complexes: D:C.226, D:C.231, D:C.234, D:C.249
- 2 x GOL: GLYCEROL(Non-functional Binders)
GOL.6: 7 residues within 4Å:- Chain B: G.144, F.145, D.170, G.178, H.179, V.180, M.202
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:G.178, B:V.180
GOL.12: 7 residues within 4Å:- Chain D: G.144, F.145, D.170, G.178, H.179, V.180, M.202
2 PLIP interactions:2 interactions with chain D- Hydrogen bonds: D:G.178, D:V.180
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Pompeu, Y.A. et al., Isoleucine 74 Plays a Key Role in Controlling Electron Transfer Between Lactococcus lactis Dihydroorotate Dehydrogenase 1B Subunits. to be published
- Release Date
- 2017-09-06
- Peptides
- Dihydroorotate dehydrogenase: AC
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit: BD - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
AB
BD
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.72 Å
- Oligo State
- hetero-2-2-mer
- Ligands
- 2 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)
- 2 x ORO: OROTIC ACID(Non-covalent)
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- 2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
- 2 x FES: FE2/S2 (INORGANIC) CLUSTER(Non-covalent)
- 2 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Pompeu, Y.A. et al., Isoleucine 74 Plays a Key Role in Controlling Electron Transfer Between Lactococcus lactis Dihydroorotate Dehydrogenase 1B Subunits. to be published
- Release Date
- 2017-09-06
- Peptides
- Dihydroorotate dehydrogenase: AC
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit: BD - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
AB
BD
B