SMTL ID : 5uff.1

Crystal Structure of Variable Lymphocyte Receptor (VLR) RBC36 with Fucose(alpha-1-2)Lactose bound

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.14 Å

Oligo State

monomer

Ligands

1 x BGC- GAL- FUC: alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose(Non-covalent)

BGC-GAL-FUC.1: 12 residues within 4Å: Chain A: H.36, D.82, T.85, F.106, C.108, C.109, A.129, D.131, Q.132, Y.153, F.155, W.183 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:H.36, A:D.82, A:D.82, A:W.183, A:Q.132, A:D.131

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Collins, B.C. et al., Structural Insights into VLR Fine Specificity for Blood Group Carbohydrates. Structure (2017)

Release Date

2017-10-18

Peptides

RBC36: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

RBC36