SMTL ID : 5ujo.2 (1 other biounit)

X-Ray Crystal Structure of Ruthenocenyl-7-Aminodesacetoxycephalosporanic Acid Covalent Acyl-Enyzme Complex with CTX-M-14 E166A Beta-Lactamase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.35 Å

Oligo State

monomer

Ligands

1 x K: POTASSIUM ION(Non-covalent)

K.1: 1 residues within 4Å: Chain A: G.213 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:G.213, H2O.2, H2O.4, H2O.7, H2O.8

1 x 8CY: ruthenocenyl-7-aminodesacetoxycephalosporanic acid, bound form(Covalent)

8CY.2: 15 residues within 4Å: Chain A: C.44, S.45, N.79, Y.80, S.105, N.107, P.142, N.145, T.146, K.209, T.210, G.211, S.212, G.213, D.214 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:N.145 Hydrogen bonds: A:S.45, A:N.79, A:S.105, A:S.105, A:N.107, A:T.210, A:S.212, A:S.212, A:S.212 Water bridges: A:R.249, A:R.249, A:R.249 Salt bridges: A:K.209

1 x LSI: ruthenocenyl-7-aminodesacetoxycephalosporanic acid(Non-covalent)

LSI.3: 6 residues within 4Å: Chain A: R.19, R.40, P.149, G.150, D.151, P.152 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.150 Water bridges: A:R.19, A:R.19 Salt bridges: A:R.19

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lewandowski, E.M. et al., Antibacterial Properties of Metallocenyl-7-ADCA Derivatives and Structure in Complex with CTX-Mbeta-Lactamase. Organometallics (2017)

Release Date

2017-02-08

Peptides

Beta-lactamase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Beta-lactamase

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