SMTL ID : 5uka.1

Salmonella typhimurium AhpC E49Q mutant

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-pentamer

Ligands

5 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 5 residues within 4Å: Chain A: S.1, L.2, F.122, I.133 Chain B: S.1 Ligand excluded by PLIP CL.3: 5 residues within 4Å: Chain A: S.1 Chain B: S.1, L.2, F.122, I.133 Ligand excluded by PLIP CL.6: 5 residues within 4Å: Chain C: S.1, L.2, F.122, I.133 Chain D: S.1 Ligand excluded by PLIP CL.7: 5 residues within 4Å: Chain C: S.1 Chain D: S.1, L.2, F.122, I.133 Ligand excluded by PLIP CL.9: 4 residues within 4Å: Chain E: S.1, L.2, F.122, I.133 Ligand excluded by PLIP

3 x K: POTASSIUM ION(Non-covalent)

K.2: 2 residues within 4Å: Chain A: T.72, D.73 No protein-ligand interaction detected (PLIP) K.4: 6 residues within 4Å: Chain B: T.72, D.73, P.99 Chain C: T.72, D.73, P.99 4 PLIP interactions: 1 interactions with chain C, 1 interactions with chain B, 2 Ligand-Water interactions Metal complexes: C:T.72, B:T.72, H2O.6, H2O.11 K.8: 6 residues within 4Å: Chain D: T.72, D.73, P.99 Chain E: T.72, D.73, P.99 5 PLIP interactions: 1 interactions with chain D, 1 interactions with chain E, 3 Ligand-Water interactions Metal complexes: D:T.72, E:T.72, H2O.18, H2O.20, H2O.21

1 x NA: SODIUM ION(Non-functional Binders)

NA.5: 3 residues within 4Å: Chain B: M.110, R.111, D.118 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:D.118

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nelson, K.J. et al., Experimentally Dissecting the Origins of Peroxiredoxin Catalysis. Antioxid.Redox Signal. (2018)

Release Date

2018-01-24

Peptides

Alkyl hydroperoxide reductase subunit C: ABCDE

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

Alkyl hydroperoxide reductase subunit C