SMTL ID : 5uly.1 (1 other biounit)

Crystal Structure of Human Protocadherin-15 EC2-3

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.64 Å

Oligo State

homo-dimer

Ligands

4 x CA: CALCIUM ION(Non-covalent)

CA.1: 5 residues within 4Å: Chain A: E.19, D.118, G.119, D.121, D.171 6 PLIP interactions: 5 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.19, A:D.118, A:G.119, A:D.121, A:D.171, H2O.2 CA.2: 5 residues within 4Å: Chain A: D.120, L.122, D.169, D.171, Q.230 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.120, A:L.122, A:D.169, A:D.171, H2O.1 CA.3: 5 residues within 4Å: Chain B: E.19, D.118, G.119, D.121, D.171 6 PLIP interactions: 5 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:E.19, B:D.118, B:G.119, B:D.121, B:D.171, H2O.3 CA.4: 5 residues within 4Å: Chain B: D.120, L.122, D.169, D.171, Q.230 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:D.120, B:L.122, B:D.169, B:D.171, H2O.2

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Choudhary, D. et al., Structural determinants of protocadherin-15 mechanics and function in hearing and balance perception. Proc.Natl.Acad.Sci.USA (2020)

Release Date

2018-08-08

Peptides

Protocadherin-15: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

Protocadherin-15

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