SMTL ID : 5umd.1

Structure of the Plasmodium falciparum 80S ribosome bound to the antimalarial drug mefloquine

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY 3.20 Å
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
2 x YMZ: (11R,12S)- Mefloquine(Non-covalent)
164 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)
5 x ZN: ZINC ION(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Wong, W. et al., Mefloquine targets the Plasmodium falciparum 80S ribosome to inhibit protein synthesis. Nat Microbiol (2017)
Release Date
2017-03-01
Peptides
60S ribosomal protein L2: D
60S ribosomal protein L3: E
60S ribosomal protein L4: F
60S ribosomal protein L11a, putative: G
60S ribosomal protein L6, putative: H
60S ribosomal protein L6-2, putative: I
60S ribosomal protein L7-3, putative: J
60S ribosomal protein L13, putative: K
60S ribosomal protein L13: L
60S ribosomal protein L23, putative: M
60S ribosomal protein L14, putative: N
60S ribosomal protein L27a, putative: O
Ribosomal protein L15: P
60S ribosomal protein L10, putative: Q
60S ribosomal protein L5, putative: R
60S ribosomal protein L18-2, putative: S
60S ribosomal protein L19: T
60S ribosomal protein L18a: U
60S ribosomal protein L21: V
60S ribosomal protein L17, putative: W
60S ribosomal protein L22, putative: X
60S ribosomal protein L23: Y
60S ribosomal protein L26, putative: Z
60S ribosomal protein L24, putative: 0
60S ribosomal protein L27: 1
60S ribosomal protein L28: 2
60S ribosomal protein L35, putative: 3
60S ribosomal protein L29, putative: 4
60S ribosomal protein L7, putative: 5
60S ribosomal protein L30e, putative: 6
60S ribosomal protein L31: 7
60S ribosomal protein L32: 8
60S ribosomal protein L35Ae, putative: 9
60S ribosomal protein L34: a
60S ribosomal protein L36: b
Ribosomal protein L37: c
60S ribosomal protein L38: d
60S ribosomal protein L39: e
Ubiquitin-60S ribosomal protein L40: f
60S ribosomal protein L41: g
60S ribosomal protein L37a: h
60S ribosomal protein L44: i
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
D
D
E
E
F
F
G
G
H
H
I
I
J
J
K
K
L
L
M
M
N
N
O
O
P
P
Q
Q
R
R
S
S
T
T
U
U
V
V
W
W
X
X
Y
Y
Z
Z
0
0
1
1
2
2
3
3
4
4
5
5
6
6
7
7
8
8
9
9
a
a
b
b
c
c
d
d
e
e
f
f
g
g
h
h
i
i

60S ribosomal protein L2

60S ribosomal protein L3

60S ribosomal protein L4

60S ribosomal protein L11a, putative

60S ribosomal protein L6, putative

60S ribosomal protein L6-2, putative

60S ribosomal protein L7-3, putative

60S ribosomal protein L13, putative

60S ribosomal protein L13

60S ribosomal protein L23, putative

60S ribosomal protein L14, putative

60S ribosomal protein L27a, putative

Ribosomal protein L15

60S ribosomal protein L10, putative

60S ribosomal protein L5, putative

60S ribosomal protein L18-2, putative

60S ribosomal protein L19

60S ribosomal protein L18a

60S ribosomal protein L21

60S ribosomal protein L17, putative

60S ribosomal protein L22, putative

60S ribosomal protein L23

60S ribosomal protein L26, putative

60S ribosomal protein L24, putative

60S ribosomal protein L27

60S ribosomal protein L28

60S ribosomal protein L35, putative

60S ribosomal protein L29, putative

60S ribosomal protein L7, putative

60S ribosomal protein L30e, putative

60S ribosomal protein L31

60S ribosomal protein L32

60S ribosomal protein L35Ae, putative

60S ribosomal protein L34

60S ribosomal protein L36

Ribosomal protein L37

60S ribosomal protein L38

60S ribosomal protein L39

Ubiquitin-60S ribosomal protein L40

60S ribosomal protein L41

60S ribosomal protein L37a

60S ribosomal protein L44

Related Entries With Identical Sequence

3j79.1 | 9bup.33 | 9bup.34 | 9bup.35 | 9bup.36 | 9bup.37 | 9bup.38 | 9bup.39 | 9bup.40 | 9bup.41 | 9bup.42 | 9bup.43 | 9bup.44 | 9bup.45 | 9bup.46 | 9bup.47 | 9bup.48 | 9bup.49 | 9bup.50 | 9bup.51 | 9bup.52 | 9bup.53 | 9bup.54 | 9bup.55 | 9bup.56 | 9bup.57 | 9bup.59 | 9bup.60 | 9bup.61 | 9bup.62  more...