SMTL ID : 5umt.1

Crystal structure of N-terminal domain of human FACT complex subunit SPT16

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.09 Å

Oligo State

monomer

Ligands

9 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 11 residues within 4Å: Chain A: I.172, A.173, K.175, G.351, M.352, G.353, E.358, L.361, M.375, V.376, F.377 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:K.175, A:M.352, A:V.376 Water bridges: A:I.354, A:E.358, A:E.358, A:E.358 EDO.2: 8 residues within 4Å: Chain A: R.13, T.54, W.55, G.58, E.179, L.182, Y.282 Ligands: EDO.9 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.13, A:R.13, A:T.54, A:G.58 EDO.3: 6 residues within 4Å: Chain A: Y.46, C.242, Y.243, F.257, S.258, F.356 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:F.257 EDO.4: 6 residues within 4Å: Chain A: S.78, K.79, I.107, R.108, E.109, K.110 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.79, A:K.110 EDO.5: 9 residues within 4Å: Chain A: N.20, K.23, E.25, D.26, Y.28, V.167, Y.170, T.171, Y.369 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:E.25, A:D.26, A:D.26, A:T.171, A:T.171, A:Y.369 Water bridges: A:N.20 EDO.6: 6 residues within 4Å: Chain A: K.196, F.197, E.200, R.201, E.204, Y.230 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.204 EDO.7: 7 residues within 4Å: Chain A: Q.248, N.252, Y.253, N.254, V.259, V.260, D.262 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.248, A:Y.253 Water bridges: A:V.260, A:V.260 EDO.8: 5 residues within 4Å: Chain A: R.16, V.174, K.175, E.176, D.177 2 PLIP interactions: 2 interactions with chain A Water bridges: A:R.16, A:D.177 EDO.9: 6 residues within 4Å: Chain A: R.13, E.176, G.178, E.179, L.182 Ligands: EDO.2 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.13 Water bridges: A:D.6, A:E.179, A:E.179

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.10: 9 residues within 4Å: Chain A: D.41, E.43, I.44, V.45, Y.46, A.47, T.50, E.60, R.278 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:I.44, A:V.45 Water bridges: A:D.41, A:E.43, A:V.45, A:T.50, A:T.50, A:R.278

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hu, Q. et al., Crystal structure of N-terminal domain of human FACT complex subunit SPT16. To Be Published

Release Date

2018-01-31

Peptides

FACT complex subunit SPT16: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

FACT complex subunit SPT16