SMTL ID : 5upk.1

CDC42 binds PAK4 via an extended GTPase-effector interface - 3 peptide: PAK4cat, PAK4-N45, CDC42

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)

ANP.1: 11 residues within 4Å: Chain B: E.84, G.85, V.90, A.103, K.105, M.150, E.151, F.152, L.153, A.157, L.202 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:E.151, B:L.153 Salt bridges: B:K.105

1 x GNP: PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER(Non-covalent)

GNP.2: 23 residues within 4Å: Chain C: A.13, V.14, G.15, K.16, T.17, C.18, F.28, E.31, Y.32, V.33, P.34, T.35, T.58, A.59, G.60, L.61, Q.116, D.118, L.119, S.158, A.159, L.160 Ligands: MG.3 22 PLIP interactions: 22 interactions with chain C Hydrogen bonds: C:A.13, C:V.14, C:G.15, C:K.16, C:K.16, C:K.16, C:T.17, C:C.18, C:Y.32, C:T.35, C:T.58, C:G.60, C:L.61, C:Q.116, C:Q.116, C:S.158, C:A.159, C:L.160 Water bridges: C:E.31 Salt bridges: C:D.118 pi-Stacking: C:F.28, C:F.28

1 x MG: MAGNESIUM ION(Non-covalent)

MG.3: 4 residues within 4Å: Chain C: T.17, V.33, T.35 Ligands: GNP.2 3 PLIP interactions: 3 interactions with chain C Metal complexes: C:T.17, C:V.33, C:T.35

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ha, B.H. et al., CDC42 binds PAK4 via an extended GTPase-effector interface. Proc. Natl. Acad. Sci. U.S.A. (2018)

Release Date

2017-12-27

Peptides

Serine/threonine-protein kinase PAK 4: A
Serine/threonine-protein kinase PAK 4: B
Cell division control protein 42 homolog: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Serine/threonine-protein kinase PAK 4

Serine/threonine-protein kinase PAK 4

Cell division control protein 42 homolog

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