SMTL ID : 5uqi.2 (2 other biounits)

E. coli CFT073 c3406 in complex with A5P

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.62 Å

Oligo State

homo-tetramer

Ligands

4 x A5P: ARABINOSE-5-PHOSPHATE(Non-covalent)

A5P.1: 10 residues within 4Å: Chain A: V.51, G.52, K.53, S.54, S.98, N.99, S.100, T.103, P.154 Chain B: H.82 12 PLIP interactions: 9 interactions with chain A, 3 interactions with chain B Hydrogen bonds: A:K.53, A:K.53, A:S.54, A:S.54, A:N.99, A:S.100, A:T.103, B:H.82, B:H.82 Water bridges: A:V.51, A:S.54, B:H.82 A5P.2: 10 residues within 4Å: Chain A: H.82 Chain B: V.51, G.52, K.53, S.54, S.98, N.99, S.100, T.103, P.154 12 PLIP interactions: 9 interactions with chain B, 3 interactions with chain A Hydrogen bonds: B:K.53, B:K.53, B:S.54, B:S.54, B:N.99, B:S.100, B:T.103, A:H.82, A:H.82 Water bridges: B:V.51, B:S.54, A:H.82 A5P.3: 10 residues within 4Å: Chain C: V.51, G.52, K.53, S.54, S.98, N.99, S.100, T.103, P.154 Chain D: H.82 11 PLIP interactions: 2 interactions with chain D, 8 interactions with chain C, 1 interactions with chain B Hydrogen bonds: D:H.82, C:K.53, C:K.53, C:S.54, C:S.54, C:N.99, C:S.100 Water bridges: D:H.82, C:V.51, C:S.54, B:H.187 A5P.4: 10 residues within 4Å: Chain C: H.82 Chain D: V.51, G.52, K.53, S.54, S.98, N.99, S.100, T.103, P.154 11 PLIP interactions: 8 interactions with chain D, 1 interactions with chain A, 2 interactions with chain C Hydrogen bonds: D:K.53, D:K.53, D:S.54, D:S.54, D:N.99, D:S.100, C:H.82 Water bridges: D:V.51, D:S.54, A:H.187, C:H.82

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cech, D.L. et al., Insights into the mechanism of arabinose-5-phosphate isomerases. To Be Published

Release Date

2018-02-21

Peptides

Phosphosugar isomerase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

Phosphosugar isomerase

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