SMTL ID : 5uwf.2 (1 other biounit)

Crystal structure of human PDE10A in complex with inhibitor 16d

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.87 Å

Oligo State

monomer

Ligands

1 x 8Q7: 9-[(1S)-2,2-difluorocyclopropane-1-carbonyl]-6-[(4-methoxyphenyl)methyl]-8,9,10,11-tetrahydropyrido[4',3':4,5]thieno[3,2-e][1,2,4]triazolo[1,5-c]pyrimidin-5(6H)-one(Non-covalent)

8Q7.1: 13 residues within 4Å: Chain A: Y.79, H.80, L.230, S.232, V.233, I.247, Y.248, E.250, F.251, M.268, Q.281, F.284, V.288 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:Y.79, A:Y.79, A:I.247, A:F.251, A:F.251, A:F.284 Hydrogen bonds: A:Q.281 Water bridges: A:E.250 pi-Stacking: A:F.251, A:F.284, A:F.284

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 6 residues within 4Å: Chain A: H.80, H.84, H.118, D.119, D.229 Ligands: MG.3 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.84, A:H.118, A:D.119, A:D.229, H2O.1

1 x MG: MAGNESIUM ION(Non-covalent)

MG.3: 2 residues within 4Å: Chain A: D.119 Ligands: ZN.2 6 PLIP interactions: 1 interactions with chain A, 5 Ligand-Water interactions Metal complexes: A:D.119, H2O.1, H2O.1, H2O.1, H2O.2, H2O.5

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dyck, B. et al., Discovery of Selective Phosphodiesterase 1 Inhibitors with Memory Enhancing Properties. J. Med. Chem. (2017)

Release Date

2017-04-26

Peptides

cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A

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