SMTL ID : 5uxh.1 (1 other biounit)

Structure of Human POFUT1 in complex with GDP-fucose

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.41 Å

Oligo State

monomer

Ligands

1 x GFB: GUANOSINE-5'-DIPHOSPHATE-BETA-L-FUCOPYRANOSE(Non-covalent)

GFB.1: 19 residues within 4Å: Chain A: G.19, R.20, F.21, G.22, N.23, H.215, R.217, D.221, W.222, M.239, A.286, T.287, D.288, P.311, A.314, D.317, S.333, S.334, F.335 18 PLIP interactions: 18 interactions with chain A Hydrogen bonds: A:R.20, A:R.20, A:R.20, A:F.21, A:G.22, A:N.23, A:T.287, A:P.311, A:D.317, A:S.334, A:S.334, A:F.335 Salt bridges: A:R.20, A:R.217, A:R.217, A:D.317 pi-Stacking: A:F.335, A:F.335

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 3 residues within 4Å: Chain A: A.9, N.39, R.78 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

McMillan, B.J. et al., Structure of human POFUT1, its requirement in ligand-independent oncogenic Notch signaling, and functional effects of Dowling-Degos mutations. Glycobiology (2017)

Release Date

2017-04-05

Peptides

GDP-fucose protein O-fucosyltransferase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

GDP-fucose protein O-fucosyltransferase 1

Related Entries With Identical Sequence