SMTL ID : 5uxz.2 (1 other biounit)

X-ray crystal structure of Halotag bound to the P9 benzothiadiazole fluorogenic ligand

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.92 Å

Oligo State

monomer

Ligands

1 x 8PM: N~2~-{[7-(dimethylamino)-2,1,3-benzothiadiazol-4-yl]sulfonyl}-N-hexyl-N~2~-methylglycinamide(Covalent)

8PM.1: 13 residues within 4Å: Chain A: N.38, D.103, W.138, A.142, F.146, F.165, T.169, M.172, G.173, V.242, L.243, N.269 Ligands: CL.2 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:D.103, A:A.142, A:F.165, A:V.242

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 7 residues within 4Å: Chain A: N.38, W.104, F.165, F.202, P.203, L.206 Ligands: 8PM.1 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, Y. et al., The Cation-pi Interaction Enables a Halo-Tag Fluorogenic Probe for Fast No-Wash Live Cell Imaging and Gel-Free Protein Quantification. Biochemistry (2017)

Release Date

2017-03-08

Peptides

Haloalkane dehalogenase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Haloalkane dehalogenase

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