SMTL ID : 5uzg.1

Crystal structure of Glorund qRRM1 domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.54 Å

Oligo State

homo-dimer

Ligands

5 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: H.22, I.41, H.42, L.43, T.45, M.96 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:I.41, A:H.42, A:L.43 GOL.2: 1 residues within 4Å: Chain A: N.52 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.52 GOL.3: 5 residues within 4Å: Chain B: H.22, I.41, H.42, L.43, M.96 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:I.41, B:H.42, B:L.43 GOL.4: 3 residues within 4Å: Chain B: T.21, H.22, K.23 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:H.22, B:K.23 Water bridges: B:T.21 GOL.5: 3 residues within 4Å: Chain B: K.9, S.62, Q.63 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:K.9, B:Q.63

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.6: 2 residues within 4Å: Chain A: R.14 Chain B: H.79 4 PLIP interactions: 2 interactions with chain B, 2 interactions with chain A Water bridges: B:H.79, A:T.53 Salt bridges: B:H.79, A:R.14 SO4.7: 2 residues within 4Å: Chain A: H.79 Chain B: R.14 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain A Water bridges: B:G.15 Salt bridges: B:R.14, A:H.79

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tamayo, J.V. et al., The Drosophila hnRNP F/H Homolog Glorund Uses Two Distinct RNA-Binding Modes to Diversify Target Recognition. Cell Rep (2017)

Release Date

2017-03-22

Peptides

AT27789p: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

AT27789p