SMTL ID : 5v2n.1

Crystal Structure of APO Human SETD8

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 5 residues within 4Å: Chain A: C.83, Y.84, A.99, T.100, R.108 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Y.84 EDO.2: 8 residues within 4Å: Chain A: Y.84, Y.86, Y.87, Y.149, G.150, D.151, R.152, S.153 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:Y.84, A:Y.87, A:Y.87, A:G.150, A:D.151, A:R.152, A:S.153 EDO.3: 3 residues within 4Å: Chain A: E.102, R.108, L.109 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.41, A:R.108, A:R.108

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chen, S. et al., The dynamic conformational landscape of the protein methyltransferase SETD8. Elife (2019)

Release Date

2018-03-07

Peptides

N-lysine methyltransferase KMT5A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

N-lysine methyltransferase KMT5A