SMTL ID : 5v5g.2 (1 other biounit)

OTU protease of Crimean Congo Hemorrhagic Fever Virus bound to ubiquitin variant CC.4

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

hetero-1-1-mer

Ligands

2 x NA: SODIUM ION(Non-functional Binders)

NA.1: 2 residues within 4Å: Chain A: Y.63, R.66 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.66, A:R.66 NA.3: 5 residues within 4Å: Chain A: G.1, P.2, G.3, M.4, F.164 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.1, A:G.1, A:G.3, A:M.4

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 10 residues within 4Å: Chain A: Y.92, R.95, M.96, E.101, W.102, G.103, S.104, E.107 Chain B: R.99, V.102 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.95, A:E.101

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, W. et al., Potent and selective inhibition of pathogenic viruses by engineered ubiquitin variants. PLoS Pathog. (2017)

Release Date

2017-05-10

Peptides

RNA-directed RNA polymerase L: A
Ubiquitin variant CC.4: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

RNA-directed RNA polymerase L

Ubiquitin variant CC.4

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