SMTL ID : 5v6j.1 (1 other biounit)

Glycan binding protein Y3 from mushroom Coprinus comatus possesses anti-leukemic activity

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.18 Å

Oligo State

homo-dimer

Ligands

2 x NHE: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID(Non-covalent)

NHE.1: 7 residues within 4Å: Chain A: A.67, S.68, N.71, I.91, A.95, P.96, F.97 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.68, A:N.71, A:F.97 NHE.2: 10 residues within 4Å: Chain B: I.65, R.66, A.67, S.68, N.71, I.91, A.95, P.96, F.97, F.99 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:I.65 Hydrogen bonds: B:S.68, B:N.71, B:F.97

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, P. et al., Cytotoxic protein from the mushroom Coprinus comatus possesses a unique mode for glycan binding and specificity. Proc. Natl. Acad. Sci. U.S.A. (2017)

Release Date

2017-08-16

Peptides

TMV resistance protein Y3: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

TMV resistance protein Y3

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