SMTL ID : 5v8t.2 (1 other biounit)

Crystal structure of SMT fusion Peptidyl-prolyl cis-trans isomerase from Burkholderia pseudomallei complexed with SF354

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x 8ZV: 2-{[3,5-bis(2-methoxyethoxy)benzene-1-carbonyl]amino}ethyl (2S)-1-(benzylsulfonyl)piperidine-2-carboxylate(Non-covalent)

8ZV.1: 14 residues within 4Å: Chain A: Y.128, F.138, D.139, R.144, F.148, V.157, I.158, W.161, Y.184, A.189, G.190, V.192, I.193, F.201 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:Y.128, A:F.148, A:V.157, A:W.161, A:W.161, A:V.192, A:I.193 Hydrogen bonds: A:I.158, A:Y.184 Water bridges: A:G.190 pi-Stacking: A:F.138

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 2 residues within 4Å: Chain A: D.146, P.147 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.146, A:P.147, H2O.2

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lorimer, D.D. et al., Crystal structure of SMT fusion Peptidyl-prolyl cis-trans isomerase from Burkholderia pseudomallei complexed with SF354. to be published

Release Date

2018-03-14

Peptides

Ubiquitin-like protein SMT3,Peptidyl-prolyl cis-trans isomerase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Ubiquitin-like protein SMT3,Peptidyl-prolyl cis-trans isomerase

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