SMTL ID : 5va0.1

Glucocorticoid Receptor DNA Binding Domain in complex with AP-1 response element from VCAM-1 Promoter

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.3, C.6, C.20, C.23 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.3, A:C.6, A:C.20, A:C.23 ZN.2: 4 residues within 4Å: Chain A: C.39, C.45, C.55, C.58 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.39, A:C.45, A:C.55, A:C.58 ZN.3: 4 residues within 4Å: Chain D: C.39, C.45, C.55, C.58 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:C.39, D:C.45, D:C.55, D:C.58 ZN.4: 4 residues within 4Å: Chain D: C.3, C.6, C.20, C.23 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:C.3, D:C.6, D:C.20, D:C.23

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Weikum, E.R. et al., Tethering not required: the glucocorticoid receptor binds directly to activator protein-1 recognition motifs to repress inflammatory genes. Nucleic Acids Res. (2017)

Release Date

2017-08-09

Peptides

Glucocorticoid receptor: AD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

D
B

Glucocorticoid receptor