SMTL ID : 5vab.1

Crystal structure of ATXR5 PHD domain in complex with histone H3

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

hetero-1-1-mer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.8, C.11, H.31, C.34 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.8, A:C.11, A:H.31, A:C.34 ZN.2: 5 residues within 4Å: Chain A: C.23, C.26, C.49, S.51, C.52 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.23, A:C.26, A:C.49, A:C.52

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bergamin, E. et al., Molecular basis for the methylation specificity of ATXR5 for histone H3. Nucleic Acids Res. (2017)

Release Date

2017-04-19

Peptides

ATXR5 PHD domain: A
Histone H3 peptide: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
F

ATXR5 PHD domain

Histone H3 peptide