SMTL ID : 5vbn.2 (1 other biounit)

Crystal Structure of human DNA polymerase epsilon B-subunit in complex with C-terminal domain of catalytic subunit

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

hetero-1-1-mer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: D.418, N.421, R.425, K.483 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.421 Water bridges: A:R.425, A:R.425 Salt bridges: A:R.425, A:K.483

2 x ZN: ZINC ION(Non-covalent)

ZN.2: 4 residues within 4Å: Chain B: C.17, C.20, C.46, C.49 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.17, B:C.20, B:C.46, B:C.49 ZN.3: 4 residues within 4Å: Chain B: C.80, C.83, C.95, C.97 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.80, B:C.83, B:C.95, B:C.97

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Baranovskiy, A.G. et al., Crystal structure of the human Pol B-subunit in complex with the C-terminal domain of the catalytic subunit. J. Biol. Chem. (2017)

Release Date

2017-08-02

Peptides

DNA polymerase epsilon subunit 2: A
DNA polymerase epsilon catalytic subunit A: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
F

DNA polymerase epsilon subunit 2

DNA polymerase epsilon catalytic subunit A

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