SMTL ID : 5vh2.1 (3 other biounits)

Crystal Structure of Mouse Cadherin-23 EC12-13 with Engineered Mutation S1339D

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.84 Å

Oligo State

monomer

Ligands

3 x CA: CALCIUM ION(Non-covalent)

CA.1: 6 residues within 4Å: Chain A: E.4, D.35, D.37, G.41, D.87, N.93 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.4, A:D.35, A:D.37, A:G.41, A:D.87 CA.2: 7 residues within 4Å: Chain A: E.20, E.74, N.105, E.106, D.108, D.141 Ligands: CA.3 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.20, A:E.74, A:E.106, A:D.108, A:D.141 CA.3: 6 residues within 4Å: Chain A: E.20, D.72, E.74, D.108, E.109 Ligands: CA.2 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.20, A:D.72, A:E.74, A:D.108, A:E.109

1 x NA: SODIUM ION(Non-functional Binders)

NA.4: 6 residues within 4Å: Chain A: E.109, A.110, D.139, I.140, D.141, D.193 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.109, A:I.140, A:D.141, A:D.141

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jaiganesh, A. et al., Zooming in on Cadherin-23: Structural Diversity and Potential Mechanisms of Inherited Deafness. Structure (2018)

Release Date

2018-04-18

Peptides

Cadherin-23: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cadherin-23

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