SMTL ID : 5vix.1

Crystal structure of Polyubiquitin with 3 ub domains, domains 1 and 2, from Naegleria fowleri ATCC 30863

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.55 Å

Oligo State

monomer

Ligands

3 x NO3: NITRATE ION(Non-functional Binders)

NO3.1: 4 residues within 4Å: Chain A: I.128, A.130, G.131, H.152 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.131, A:H.152 Water bridges: A:A.130 NO3.2: 2 residues within 4Å: Chain A: T.91, T.93 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:T.91, A:T.93 Water bridges: A:L.92, A:L.155, A:L.155 NO3.3: 3 residues within 4Å: Chain A: I.52, V.78, R.80 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.80, A:R.80

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Abendroth, J. et al., Crystal structure of polyubiquitin with 3 ub domains, domains 1 and 2, from Naegleria fowleri ATCC 30863. TO BE PUBLISHED

Release Date

2017-05-24

Peptides

Polyubiquitin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Polyubiquitin