SMTL ID : 5vnp.2 (1 other biounit)

X-ray crystal structure of Halotag bound to the P1 benzoxadiazole fluorogenic ligand

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.23 Å

Oligo State

monomer

Ligands

1 x 9FM: N-{2-[2-(hexyloxy)ethoxy]ethyl}-N~2~-methyl-N~2~-{[7-(methylamino)-2,1,3-benzoxadiazol-4-yl]sulfonyl}glycinamide(Covalent)

9FM.1: 14 residues within 4Å: Chain A: D.103, F.141, A.142, T.145, F.146, V.164, G.168, T.169, M.172, G.173, V.242, L.243, N.269 Ligands: CL.2 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:D.103, A:F.146, A:L.243, A:N.269 Hydrogen bonds: A:T.145, A:T.169

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 7 residues within 4Å: Chain A: N.38, W.104, F.165, F.202, P.203, L.206 Ligands: 9FM.1 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, Y. et al., AgHalo: A Facile Fluorogenic Sensor to Detect Drug-Induced Proteome Stress. Angew. Chem. Int. Ed. Engl. (2017)

Release Date

2017-06-14

Peptides

Haloalkane dehalogenase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Haloalkane dehalogenase

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