SMTL ID : 5vri.2 (1 other biounit)

Crystal structure of SsoPox AsA6 mutant (F46L-C258A-W263M-I280T) - closed form

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

homo-dimer

Ligands

2 x CO: COBALT (II) ION(Non-covalent)

CO.1: 6 residues within 4Å: Chain A: H.22, K.137, H.170, H.199, R.223 Ligands: FE2.2 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.170, A:H.199, H2O.1 CO.5: 6 residues within 4Å: Chain B: H.22, K.137, H.170, H.199, R.223 Ligands: FE2.6 3 PLIP interactions: 2 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:H.170, B:H.199, H2O.8

2 x FE2: FE (II) ION(Non-covalent)

FE2.2: 5 residues within 4Å: Chain A: H.22, H.24, K.137, D.256 Ligands: CO.1 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.22, A:H.24, A:D.256, H2O.1 FE2.6: 5 residues within 4Å: Chain B: H.22, H.24, K.137, D.256 Ligands: CO.5 4 PLIP interactions: 3 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:H.22, B:H.24, B:D.256, H2O.8

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 4 residues within 4Å: Chain A: R.223, D.256, I.261, W.278 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.223 EDO.8: 3 residues within 4Å: Chain B: H.24, D.256, W.278 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:R.223

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 6 residues within 4Å: Chain A: N.160, K.164, G.189, V.190, D.191, K.194 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.160, A:K.164, A:D.191 GOL.7: 5 residues within 4Å: Chain B: N.160, G.189, V.190, D.191, K.194 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:N.160, B:G.189, B:D.191

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jacquet, P. et al., Rational engineering of a native hyperthermostable lactonase into a broad spectrum phosphotriesterase. Sci Rep (2017)

Release Date

2017-12-20

Peptides

Aryldialkylphosphatase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Aryldialkylphosphatase

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